Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Dkk1O54908 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.62□□□□□ -0.23
Dkk1O54908 Gm12644-201ENSMUST00000119935 606 ntBASIC13.62□□□□□ -0.23
Dkk1O54908 Gm1848-201ENSMUST00000120711 789 ntBASIC13.62□□□□□ -0.23
Dkk1O54908 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.62□□□□□ -0.23
Dkk1O54908 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.62□□□□□ -0.23
Dkk1O54908 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Dkk1O54908 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.62□□□□□ -0.23
Dkk1O54908 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.62□□□□□ -0.23
Dkk1O54908 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Dkk1O54908 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.62□□□□□ -0.23
Dkk1O54908 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Dkk1O54908 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.62□□□□□ -0.23
Dkk1O54908 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dkk1O54908 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Dkk1O54908 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Dkk1O54908 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.61□□□□□ -0.23
Dkk1O54908 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Dkk1O54908 Gm12978-201ENSMUST00000121250 522 ntBASIC13.61□□□□□ -0.23
Dkk1O54908 Gm23884-201ENSMUST00000122687 294 ntBASIC13.61□□□□□ -0.23
Dkk1O54908 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.61□□□□□ -0.23
Dkk1O54908 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.61□□□□□ -0.23
Dkk1O54908 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Dkk1O54908 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.61□□□□□ -0.23
Dkk1O54908 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Dkk1O54908 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.61□□□□□ -0.23
Dkk1O54908 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Dkk1O54908 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Dkk1O54908 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC13.6□□□□□ -0.23
Dkk1O54908 Gm12497-201ENSMUST00000138778 237 ntBASIC13.6□□□□□ -0.23
Dkk1O54908 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Dkk1O54908 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC13.6□□□□□ -0.23
Dkk1O54908 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Gm43708-201ENSMUST00000198857 961 ntBASIC13.6□□□□□ -0.23
Dkk1O54908 Gm7506-201ENSMUST00000207758 815 ntBASIC13.6□□□□□ -0.23
Dkk1O54908 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.6□□□□□ -0.23
Dkk1O54908 AC122305.2-201ENSMUST00000215148 834 ntBASIC13.6□□□□□ -0.23
Dkk1O54908 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 AC131100.2-201ENSMUST00000227701 998 ntBASIC13.6□□□□□ -0.23
Dkk1O54908 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.6□□□□□ -0.23
Dkk1O54908 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Dkk1O54908 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Dkk1O54908 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.6□□□□□ -0.23
Dkk1O54908 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Dkk1O54908 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms