Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Gm43767-201ENSMUST00000198933 381 ntBASIC16.16■□□□□ 0.18
Gm17535J3KMR8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17535J3KMR8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Gm13365-201ENSMUST00000121188 973 ntBASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Gm11745-201ENSMUST00000121669 448 ntBASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Mir1895-201ENSMUST00000122615 79 ntBASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Gm16026-204ENSMUST00000162652 683 ntBASIC16.15■□□□□ 0.18
Gm17535J3KMR8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17535J3KMR8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Gm17535J3KMR8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm17535J3KMR8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.14■□□□□ 0.18
Gm17535J3KMR8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm17535J3KMR8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 BC037039-201ENSMUST00000192003 2205 ntBASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Gm26308-201ENSMUST00000157768 69 ntBASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17535J3KMR8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.13■□□□□ 0.17
Gm17535J3KMR8 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17535J3KMR8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Asic1-205ENSMUST00000228185 1818 ntBASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17535J3KMR8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms