Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.3■□□□□ 0.52
NpcdF8VQB8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Gm14928-201ENSMUST00000120198 477 ntBASIC18.29■□□□□ 0.52
NpcdF8VQB8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.29■□□□□ 0.52
NpcdF8VQB8 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.29■□□□□ 0.52
NpcdF8VQB8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NpcdF8VQB8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.28■□□□□ 0.52
NpcdF8VQB8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.28■□□□□ 0.52
NpcdF8VQB8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.28■□□□□ 0.52
NpcdF8VQB8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.28■□□□□ 0.52
NpcdF8VQB8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.28■□□□□ 0.52
NpcdF8VQB8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NpcdF8VQB8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Gm27680-201ENSMUST00000184192 160 ntBASIC18.27■□□□□ 0.52
NpcdF8VQB8 Gm28630-201ENSMUST00000187806 498 ntBASIC18.27■□□□□ 0.52
NpcdF8VQB8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NpcdF8VQB8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
NpcdF8VQB8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
NpcdF8VQB8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms