Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Gm27731-201ENSMUST00000185192 107 ntBASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Gm7399-201ENSMUST00000032395 858 ntBASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Gm37714-201ENSMUST00000194742 342 ntBASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc188F6WEU2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ccdc188F6WEU2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc188F6WEU2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.27■□□□□ 0.03
Ccdc188F6WEU2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc188F6WEU2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc188F6WEU2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.27■□□□□ 0.03
Ccdc188F6WEU2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc188F6WEU2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc188F6WEU2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.27■□□□□ 0.03
Ccdc188F6WEU2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Gm14723-201ENSMUST00000118686 215 ntBASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Gm18753-201ENSMUST00000201000 566 ntBASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc188F6WEU2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms