Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh17E9PXF0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh17E9PXF0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdh17E9PXF0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh17E9PXF0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh17E9PXF0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh17E9PXF0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdh17E9PXF0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Gm17968-201ENSMUST00000194902 784 ntBASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Gm44492-201ENSMUST00000197012 141 ntBASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Grk6-207ENSMUST00000225925 2769 ntBASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh17E9PXF0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Chchd1-203ENSMUST00000224633 557 ntBASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh17E9PXF0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Prob1-201ENSMUST00000097619 3021 ntBASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh17E9PXF0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms