Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21-psA0A140T8R2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Olfr129-201ENSMUST00000122318 993 ntBASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Gm12497-201ENSMUST00000138778 237 ntBASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21-psA0A140T8R2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Gm25745-201ENSMUST00000174945 133 ntBASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vma21-psA0A140T8R2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21-psA0A140T8R2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21-psA0A140T8R2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21-psA0A140T8R2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21-psA0A140T8R2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21-psA0A140T8R2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms