Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm15794-201ENSMUST00000120182 631 ntBASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm12134-201ENSMUST00000122109 520 ntBASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm27742-201ENSMUST00000184667 60 ntBASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ighv1-11A0A0A6YWI9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms