Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm18489-201ENSMUST00000172565 551 ntBASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm8318-201ENSMUST00000182954 872 ntBASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm7787-201ENSMUST00000216858 688 ntBASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Gm11764-201ENSMUST00000120221 623 ntBASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Gm18733-201ENSMUST00000173950 856 ntBASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-4A0A075B6B4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms