Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-1A0A075B5Z8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm8344-201ENSMUST00000119813 856 ntBASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-1A0A075B5Z8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.25□□□□□ -0.45
Trav6-1A0A075B5Z8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm15565-201ENSMUST00000118890 427 ntBASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm15794-201ENSMUST00000120182 631 ntBASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-1A0A075B5Z8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms