Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav5-1A0A075B5Z7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm44492-201ENSMUST00000197012 141 ntBASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav5-1A0A075B5Z7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav5-1A0A075B5Z7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-1A0A075B5Z7 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.05□□□□□ -0.32
Trav5-1A0A075B5Z7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-1A0A075B5Z7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-1A0A075B5Z7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-1A0A075B5Z7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-1A0A075B5Z7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms