Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Gm3550W4VSN7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Gm12497-201ENSMUST00000138778 237 ntBASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Gm7367-201ENSMUST00000057611 492 ntBASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.98□□□□□ -0.33
Gm3550W4VSN7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3550W4VSN7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.97□□□□□ -0.33
Gm3550W4VSN7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3550W4VSN7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3550W4VSN7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms