Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Gm18049-201ENSMUST00000208909 581 ntBASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgr5Q9Z1P4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lgr5Q9Z1P4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Celf4-206ENSMUST00000224553 1729 ntBASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Gm23547-201ENSMUST00000158210 271 ntBASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lgr5Q9Z1P4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gm8410-201ENSMUST00000117225 605 ntBASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gm5745-201ENSMUST00000183748 313 ntBASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gm9063-201ENSMUST00000223299 582 ntBASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.15■□□□□ 0.5
Lgr5Q9Z1P4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lgr5Q9Z1P4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms