Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Gm25990-201ENSMUST00000102440 86 ntBASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Gm5864-201ENSMUST00000202263 970 ntBASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40aQ9R1C7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Gm13884-201ENSMUST00000118103 829 ntBASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Gm7862-201ENSMUST00000121461 292 ntBASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40aQ9R1C7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Gm15358-201ENSMUST00000119249 520 ntBASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40aQ9R1C7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Gm11452-201ENSMUST00000122376 690 ntBASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Gm6089-201ENSMUST00000197666 938 ntBASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.79■□□□□ 0.28
Prpf40aQ9R1C7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms