Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim44Q9QXA7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim44Q9QXA7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim44Q9QXA7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim44Q9QXA7 Gm9731-201ENSMUST00000209480 747 ntBASIC17.73■□□□□ 0.43
Trim44Q9QXA7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim44Q9QXA7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Gm36967-201ENSMUST00000193814 266 ntBASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim44Q9QXA7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim44Q9QXA7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.71■□□□□ 0.42
Trim44Q9QXA7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim44Q9QXA7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim44Q9QXA7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim44Q9QXA7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms