Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgn5Q9JL35 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
Hmgn5Q9JL35 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Hmgn5Q9JL35 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Hmgn5Q9JL35 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn5Q9JL35 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Gm14722-201ENSMUST00000118943 689 ntBASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Gm9987-201ENSMUST00000069768 567 ntBASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn5Q9JL35 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Mir5130-201ENSMUST00000175160 84 ntBASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Gm27011-201ENSMUST00000182352 972 ntBASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Gm8520-201ENSMUST00000186517 868 ntBASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn5Q9JL35 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms