Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ube3bQ9ES34 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Gm11025-201ENSMUST00000140773 466 ntBASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Gm27494-201ENSMUST00000184735 189 ntBASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Gm43767-201ENSMUST00000198933 381 ntBASIC18.09■□□□□ 0.49
Ube3bQ9ES34 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.09■□□□□ 0.49
Ube3bQ9ES34 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.09■□□□□ 0.49
Ube3bQ9ES34 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube3bQ9ES34 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Ube3bQ9ES34 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.08■□□□□ 0.49
Ube3bQ9ES34 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Ube3bQ9ES34 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.08■□□□□ 0.49
Ube3bQ9ES34 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube3bQ9ES34 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Ube3bQ9ES34 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube3bQ9ES34 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Mir1895-201ENSMUST00000122615 79 ntBASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Gm16026-204ENSMUST00000162652 683 ntBASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Ube3bQ9ES34 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms