Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Gm15467-201ENSMUST00000120582 445 ntBASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdc40Q9DC48 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Gm13036-201ENSMUST00000117799 748 ntBASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Gm11779-201ENSMUST00000118541 368 ntBASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Gm18622-201ENSMUST00000219361 595 ntBASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdc40Q9DC48 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.18□□□□□ -0.14
Cdc40Q9DC48 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cdc40Q9DC48 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdc40Q9DC48 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdc40Q9DC48 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cdc40Q9DC48 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdc40Q9DC48 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdc40Q9DC48 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdc40Q9DC48 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms