Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Sybu-209ENSMUST00000228639 4113 ntBASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Gm27300-201ENSMUST00000184085 97 ntBASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Gm27525-201ENSMUST00000184465 107 ntBASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Gm27335-201ENSMUST00000184758 97 ntBASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ssmem1Q9D9Y8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssmem1Q9D9Y8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gm12260-201ENSMUST00000122447 411 ntBASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Gm8000-201ENSMUST00000188378 592 ntBASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssmem1Q9D9Y8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms