Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpusd4Q9CWX4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpusd4Q9CWX4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Birc2-201ENSMUST00000054878 378 ntBASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpusd4Q9CWX4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpusd4Q9CWX4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms