Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm15358-201ENSMUST00000119249 520 ntBASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb1Q9CQ70 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb1Q9CQ70 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb1Q9CQ70 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb1Q9CQ70 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb1Q9CQ70 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Gm12644-201ENSMUST00000119935 606 ntBASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb1Q9CQ70 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms