Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smtnl1Q99LM3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smtnl1Q99LM3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smtnl1Q99LM3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smtnl1Q99LM3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smtnl1Q99LM3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Gm14859-201ENSMUST00000117752 357 ntBASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smtnl1Q99LM3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smtnl1Q99LM3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smtnl1Q99LM3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smtnl1Q99LM3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms