Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Gm16198-201ENSMUST00000118766 670 ntBASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Gm2423-201ENSMUST00000074863 733 ntBASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cstf1Q99LC2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Gm25287-201ENSMUST00000103846 110 ntBASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Gm22918-201ENSMUST00000103855 110 ntBASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Gm17837-201ENSMUST00000186435 985 ntBASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.25■□□□□ 0.03
Cstf1Q99LC2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cstf1Q99LC2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Mir8102-201ENSMUST00000184148 139 ntBASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cstf1Q99LC2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Gm13223-201ENSMUST00000118609 747 ntBASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Gm27989-201ENSMUST00000184721 107 ntBASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cstf1Q99LC2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms