Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps4Q99KG7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps4Q99KG7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.88■□□□□ 0.45
Hps4Q99KG7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps4Q99KG7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Gm6973-201ENSMUST00000117080 721 ntBASIC17.87■□□□□ 0.45
Hps4Q99KG7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Gm16026-204ENSMUST00000162652 683 ntBASIC17.87■□□□□ 0.45
Hps4Q99KG7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.87■□□□□ 0.45
Hps4Q99KG7 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.87■□□□□ 0.45
Hps4Q99KG7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps4Q99KG7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hps4Q99KG7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.86■□□□□ 0.45
Hps4Q99KG7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.86■□□□□ 0.45
Hps4Q99KG7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps4Q99KG7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps4Q99KG7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm22065-201ENSMUST00000103753 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm22066-201ENSMUST00000103761 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm24932-201ENSMUST00000103763 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm24115-201ENSMUST00000103799 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm22190-201ENSMUST00000103827 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm22191-201ENSMUST00000103831 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm24721-201ENSMUST00000103849 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm28018-201ENSMUST00000103869 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm26399-201ENSMUST00000103937 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Hps4Q99KG7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.85■□□□□ 0.45
Hps4Q99KG7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps4Q99KG7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.85■□□□□ 0.45
Hps4Q99KG7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm25349-201ENSMUST00000177728 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm23616-201ENSMUST00000177797 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm25871-201ENSMUST00000177816 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm24752-201ENSMUST00000178240 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm24496-201ENSMUST00000178287 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm25649-201ENSMUST00000178476 110 ntBASIC17.85■□□□□ 0.45
Hps4Q99KG7 Gm25548-201ENSMUST00000178681 110 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms