Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Gm25745-201ENSMUST00000174945 133 ntBASIC13.94□□□□□ -0.18
Lims1Q99JW4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.94□□□□□ -0.18
Lims1Q99JW4 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.94□□□□□ -0.18
Lims1Q99JW4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.94□□□□□ -0.18
Lims1Q99JW4 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.94□□□□□ -0.18
Lims1Q99JW4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Grk6-207ENSMUST00000225925 2769 ntBASIC13.94□□□□□ -0.18
Lims1Q99JW4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.93□□□□□ -0.18
Lims1Q99JW4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.93□□□□□ -0.18
Lims1Q99JW4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gm4459-201ENSMUST00000118750 468 ntBASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gm12497-201ENSMUST00000138778 237 ntBASIC13.93□□□□□ -0.18
Lims1Q99JW4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lims1Q99JW4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Gm8318-201ENSMUST00000182954 872 ntBASIC13.92□□□□□ -0.18
Lims1Q99JW4 Gm27867-201ENSMUST00000184778 125 ntBASIC13.92□□□□□ -0.18
Lims1Q99JW4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.92□□□□□ -0.18
Lims1Q99JW4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lims1Q99JW4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lims1Q99JW4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.91□□□□□ -0.18
Lims1Q99JW4 Gm23547-201ENSMUST00000158210 271 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms