Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfc4Q99J62 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.58■□□□□ 0.4
Rfc4Q99J62 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.57■□□□□ 0.4
Rfc4Q99J62 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfc4Q99J62 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.56■□□□□ 0.4
Rfc4Q99J62 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Gm6973-201ENSMUST00000117080 721 ntBASIC17.56■□□□□ 0.4
Rfc4Q99J62 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Gm5745-201ENSMUST00000183748 313 ntBASIC17.56■□□□□ 0.4
Rfc4Q99J62 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfc4Q99J62 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rfc4Q99J62 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfc4Q99J62 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfc4Q99J62 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms