Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm5682-201ENSMUST00000173402 505 ntBASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb1Q91Y08 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb1Q91Y08 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Gm10499-201ENSMUST00000174094 934 ntBASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Mir8098-201ENSMUST00000184011 137 ntBASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb1Q91Y08 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Gm11764-201ENSMUST00000120221 623 ntBASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Gm15173-201ENSMUST00000122049 433 ntBASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Gm6550-201ENSMUST00000187574 993 ntBASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Gm9682-201ENSMUST00000197505 556 ntBASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Gm7461-201ENSMUST00000058918 827 ntBASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb1Q91Y08 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb1Q91Y08 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms