Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb22Q91XZ8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Gm5364-201ENSMUST00000216789 889 ntBASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb22Q91XZ8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb22Q91XZ8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb22Q91XZ8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhb22Q91XZ8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms