Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Gm9103-201ENSMUST00000119371 405 ntBASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Gm28033-201ENSMUST00000184224 96 ntBASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga3Q91XY5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Asic1-205ENSMUST00000228185 1818 ntBASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Gm4459-201ENSMUST00000118750 468 ntBASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Gm7506-201ENSMUST00000207758 815 ntBASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Gm8655-201ENSMUST00000221159 852 ntBASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga3Q91XY5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga3Q91XY5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms