Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp3Q91W36 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp3Q91W36 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.67■□□□□ 0.1
Usp3Q91W36 Gm4995-201ENSMUST00000117247 432 ntBASIC15.67■□□□□ 0.1
Usp3Q91W36 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
Usp3Q91W36 Gm20614-201ENSMUST00000177106 632 ntBASIC15.67■□□□□ 0.1
Usp3Q91W36 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.67■□□□□ 0.1
Usp3Q91W36 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.67■□□□□ 0.1
Usp3Q91W36 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp3Q91W36 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp3Q91W36 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.67■□□□□ 0.1
Usp3Q91W36 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.66■□□□□ 0.1
Usp3Q91W36 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Usp3Q91W36 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Usp3Q91W36 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.66■□□□□ 0.1
Usp3Q91W36 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp3Q91W36 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp3Q91W36 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp3Q91W36 Gm5177-201ENSMUST00000183092 997 ntBASIC15.66■□□□□ 0.1
Usp3Q91W36 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.66■□□□□ 0.1
Usp3Q91W36 Gm37935-201ENSMUST00000192012 982 ntBASIC15.66■□□□□ 0.1
Usp3Q91W36 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.66■□□□□ 0.1
Usp3Q91W36 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usp3Q91W36 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Usp3Q91W36 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Usp3Q91W36 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp3Q91W36 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.65■□□□□ 0.1
Usp3Q91W36 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.65■□□□□ 0.1
Usp3Q91W36 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Gm25911-201ENSMUST00000157621 56 ntBASIC15.65■□□□□ 0.1
Usp3Q91W36 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.65■□□□□ 0.1
Usp3Q91W36 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.65■□□□□ 0.1
Usp3Q91W36 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Usp3Q91W36 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp3Q91W36 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Usp3Q91W36 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Gm12008-201ENSMUST00000117791 755 ntBASIC15.64■□□□□ 0.09
Usp3Q91W36 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.64■□□□□ 0.09
Usp3Q91W36 Gm45747-201ENSMUST00000212203 999 ntBASIC15.64■□□□□ 0.09
Usp3Q91W36 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
Usp3Q91W36 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Usp3Q91W36 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.64■□□□□ 0.09
Usp3Q91W36 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp3Q91W36 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.64■□□□□ 0.09
Usp3Q91W36 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms