Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Gm14127-201ENSMUST00000117906 678 ntBASIC15.1■□□□□ 0.01
Vsx1Q91V10 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.1■□□□□ 0.01
Vsx1Q91V10 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.09■□□□□ 0.01
Vsx1Q91V10 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Gm18057-201ENSMUST00000208220 503 ntBASIC15.09■□□□□ 0.01
Vsx1Q91V10 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.09■□□□□ 0.01
Vsx1Q91V10 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vsx1Q91V10 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vsx1Q91V10 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vsx1Q91V10 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vsx1Q91V10 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vsx1Q91V10 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.08■□□□□ 0
Vsx1Q91V10 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.08■□□□□ 0
Vsx1Q91V10 Gm38294-201ENSMUST00000192831 381 ntBASIC15.08■□□□□ 0
Vsx1Q91V10 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.08■□□□□ 0
Vsx1Q91V10 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.08■□□□□ 0
Vsx1Q91V10 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.08■□□□□ 0
Vsx1Q91V10 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.08■□□□□ 0
Vsx1Q91V10 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Vsx1Q91V10 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Vsx1Q91V10 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vsx1Q91V10 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.08■□□□□ 0
Vsx1Q91V10 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Vsx1Q91V10 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vsx1Q91V10 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 Gm16198-201ENSMUST00000118766 670 ntBASIC15.07■□□□□ 0
Vsx1Q91V10 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 Gm27618-201ENSMUST00000183671 60 ntBASIC15.07■□□□□ 0
Vsx1Q91V10 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.07■□□□□ 0
Vsx1Q91V10 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.07■□□□□ 0
Vsx1Q91V10 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.07■□□□□ 0
Vsx1Q91V10 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.07■□□□□ 0
Vsx1Q91V10 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vsx1Q91V10 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vsx1Q91V10 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms