Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm5356-201ENSMUST00000093326 615 ntBASIC17.94■□□□□ 0.46
StrcQ8VIM6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
StrcQ8VIM6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
StrcQ8VIM6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
StrcQ8VIM6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
StrcQ8VIM6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
StrcQ8VIM6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
StrcQ8VIM6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Gm12390-201ENSMUST00000117897 397 ntBASIC17.93■□□□□ 0.46
StrcQ8VIM6 Gm15806-201ENSMUST00000120696 955 ntBASIC17.93■□□□□ 0.46
StrcQ8VIM6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Gm9002-201ENSMUST00000178437 499 ntBASIC17.93■□□□□ 0.46
StrcQ8VIM6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 BC001981-202ENSMUST00000191393 1545 ntBASIC17.93■□□□□ 0.46
StrcQ8VIM6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
StrcQ8VIM6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.92■□□□□ 0.46
StrcQ8VIM6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.92■□□□□ 0.46
StrcQ8VIM6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.92■□□□□ 0.46
StrcQ8VIM6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Gm13392-201ENSMUST00000117708 150 ntBASIC17.92■□□□□ 0.46
StrcQ8VIM6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Gm19220-201ENSMUST00000222682 803 ntBASIC17.92■□□□□ 0.46
StrcQ8VIM6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
StrcQ8VIM6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Gm8062-201ENSMUST00000139696 444 ntBASIC17.91■□□□□ 0.46
StrcQ8VIM6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.91■□□□□ 0.46
StrcQ8VIM6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.91■□□□□ 0.46
StrcQ8VIM6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
StrcQ8VIM6 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.91■□□□□ 0.46
StrcQ8VIM6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.9■□□□□ 0.46
StrcQ8VIM6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Gm12957-201ENSMUST00000117835 377 ntBASIC17.9■□□□□ 0.46
StrcQ8VIM6 Gm13226-201ENSMUST00000117838 404 ntBASIC17.9■□□□□ 0.46
StrcQ8VIM6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
StrcQ8VIM6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
StrcQ8VIM6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
StrcQ8VIM6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms