Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Gm6888-201ENSMUST00000221983 706 ntBASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shtn1Q8K2Q9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shtn1Q8K2Q9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shtn1Q8K2Q9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Gm29541-201ENSMUST00000191351 678 ntBASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shtn1Q8K2Q9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Mir8102-201ENSMUST00000184148 139 ntBASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms