Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc60Q8C4J0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc60Q8C4J0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc60Q8C4J0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc60Q8C4J0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Gm27300-201ENSMUST00000184085 97 ntBASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Gm27335-201ENSMUST00000184758 97 ntBASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc60Q8C4J0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc60Q8C4J0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc60Q8C4J0 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 AW822252-206ENSMUST00000208904 237 ntBASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Psmb5-202ENSMUST00000227257 622 ntBASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc60Q8C4J0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc60Q8C4J0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms