Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptcd1Q8C2E4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Gm16198-201ENSMUST00000118766 670 ntBASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ptcd1Q8C2E4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptcd1Q8C2E4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ptcd1Q8C2E4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.77■□□□□ 0.59
Ptcd1Q8C2E4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Gm25287-201ENSMUST00000103846 110 ntBASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Gm22918-201ENSMUST00000103855 110 ntBASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptcd1Q8C2E4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptcd1Q8C2E4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms