Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Gm5587-201ENSMUST00000206270 674 ntBASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cpsf7Q8BTV2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf7Q8BTV2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf7Q8BTV2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Mir770-201ENSMUST00000103252 94 ntBASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf7Q8BTV2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms