Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 AA414768-201ENSMUST00000121924 1257 ntBASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Olfr129-201ENSMUST00000122318 993 ntBASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Mir3081-201ENSMUST00000175305 84 ntBASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp2bQ8BJF9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp2bQ8BJF9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms