Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ubp1Q811S7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.07■□□□□ 0
Ubp1Q811S7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ubp1Q811S7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ubp1Q811S7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.07■□□□□ 0
Ubp1Q811S7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Gm12350-201ENSMUST00000121208 462 ntBASIC15.07■□□□□ 0
Ubp1Q811S7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.07■□□□□ 0
Ubp1Q811S7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Mir5126-201ENSMUST00000175513 77 ntBASIC15.07■□□□□ 0
Ubp1Q811S7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.07■□□□□ 0
Ubp1Q811S7 Gm37153-201ENSMUST00000193637 231 ntBASIC15.07■□□□□ 0
Ubp1Q811S7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.07■□□□□ 0
Ubp1Q811S7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ubp1Q811S7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ubp1Q811S7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ubp1Q811S7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ubp1Q811S7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ubp1Q811S7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ubp1Q811S7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ubp1Q811S7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ubp1Q811S7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Gm13036-201ENSMUST00000117799 748 ntBASIC15.06■□□□□ 0
Ubp1Q811S7 Gm14722-201ENSMUST00000118943 689 ntBASIC15.06■□□□□ 0
Ubp1Q811S7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ubp1Q811S7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.06■□□□□ 0
Ubp1Q811S7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.06■□□□□ 0
Ubp1Q811S7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.06■□□□□ 0
Ubp1Q811S7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ubp1Q811S7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ubp1Q811S7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Ubp1Q811S7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubp1Q811S7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubp1Q811S7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubp1Q811S7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubp1Q811S7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.05■□□□□ 0
Ubp1Q811S7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubp1Q811S7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubp1Q811S7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ubp1Q811S7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubp1Q811S7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ubp1Q811S7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.05■□□□□ 0
Ubp1Q811S7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 Gm45167-201ENSMUST00000208007 322 ntBASIC15.05■□□□□ -0
Ubp1Q811S7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ubp1Q811S7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.05■□□□□ -0
Ubp1Q811S7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Ubp1Q811S7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.05■□□□□ -0
Ubp1Q811S7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Ubp1Q811S7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.05■□□□□ -0
Ubp1Q811S7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.05■□□□□ -0
Ubp1Q811S7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ubp1Q811S7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ubp1Q811S7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Ubp1Q811S7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ubp1Q811S7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms