Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
ShprhQ7TPQ3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ShprhQ7TPQ3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gm46209-201ENSMUST00000217912 553 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gm5357-201ENSMUST00000212720 1924 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 App-207ENSMUST00000227737 2827 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gm21854-201ENSMUST00000179901 471 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Olfr286-202ENSMUST00000205305 969 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Gm45453-201ENSMUST00000211758 853 ntBASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ShprhQ7TPQ3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Ldb3-207ENSMUST00000227819 1499 ntBASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ShprhQ7TPQ3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
ShprhQ7TPQ3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ShprhQ7TPQ3 Gm14928-201ENSMUST00000120198 477 ntBASIC21.33■■□□□ 1
ShprhQ7TPQ3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC21.33■■□□□ 1
ShprhQ7TPQ3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
ShprhQ7TPQ3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ShprhQ7TPQ3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC21.33■■□□□ 1
ShprhQ7TPQ3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
ShprhQ7TPQ3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21.33■■□□□ 1
ShprhQ7TPQ3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ShprhQ7TPQ3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Gm7820-201ENSMUST00000121012 1052 ntBASIC21.31■■□□□ 1
ShprhQ7TPQ3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Gm8515-201ENSMUST00000194852 576 ntBASIC21.31■■□□□ 1
ShprhQ7TPQ3 Gm45195-201ENSMUST00000205597 1008 ntBASIC21.31■■□□□ 1
ShprhQ7TPQ3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Gm6180-201ENSMUST00000065243 498 ntBASIC21.31■■□□□ 1
ShprhQ7TPQ3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms