Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1l1Q6T3U4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1l1Q6T3U4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.23■□□□□ 0.51
Npc1l1Q6T3U4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Gm11745-201ENSMUST00000121669 448 ntBASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1l1Q6T3U4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 AA543401-201ENSMUST00000164248 1269 ntBASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Gm5312-201ENSMUST00000203728 547 ntBASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1l1Q6T3U4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Npc1l1Q6T3U4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Npc1l1Q6T3U4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Npc1l1Q6T3U4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms