Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm23634-201ENSMUST00000175071 91 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm8825-201ENSMUST00000182565 998 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm4518-201ENSMUST00000182638 718 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Smarcd3Q6P9Z1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcd3Q6P9Z1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd3Q6P9Z1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd3Q6P9Z1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd3Q6P9Z1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd3Q6P9Z1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd3Q6P9Z1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd3Q6P9Z1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarcd3Q6P9Z1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd3Q6P9Z1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 AA414768-201ENSMUST00000121924 1257 ntBASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Gm9172-201ENSMUST00000212092 954 ntBASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Grk6-207ENSMUST00000225925 2769 ntBASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms