Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf6Q6NVF9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf6Q6NVF9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf6Q6NVF9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf6Q6NVF9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Cpsf6Q6NVF9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf6Q6NVF9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf6Q6NVF9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf6Q6NVF9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Gm28033-201ENSMUST00000184224 96 ntBASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf6Q6NVF9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf6Q6NVF9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms