Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm4Q6IRU2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm4Q6IRU2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm4Q6IRU2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm4Q6IRU2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm4Q6IRU2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm4Q6IRU2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tpm4Q6IRU2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.12■□□□□ 0.33
Tpm4Q6IRU2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Gm25406-201ENSMUST00000157599 105 ntBASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tpm4Q6IRU2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Rprl3-201ENSMUST00000157400 290 ntBASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Gm29518-201ENSMUST00000190858 372 ntBASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm4Q6IRU2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm4Q6IRU2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm4Q6IRU2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm4Q6IRU2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Tpm4Q6IRU2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm4Q6IRU2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 AA414768-201ENSMUST00000121924 1257 ntBASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Gm23634-201ENSMUST00000175071 91 ntBASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms