Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ParpbpQ6IRT3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Gm6296-201ENSMUST00000222599 943 ntBASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Rps4l-201ENSMUST00000071745 943 ntBASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ParpbpQ6IRT3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ParpbpQ6IRT3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gm13884-201ENSMUST00000118103 829 ntBASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gm15173-201ENSMUST00000122049 433 ntBASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gm11780-201ENSMUST00000136880 516 ntBASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms