Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm27514-201ENSMUST00000183692 110 ntBASIC12.46□□□□□ -0.42
Col7a1Q63870 Gm6013-201ENSMUST00000212264 699 ntBASIC12.46□□□□□ -0.42
Col7a1Q63870 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.46□□□□□ -0.42
Col7a1Q63870 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col7a1Q63870 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.46□□□□□ -0.42
Col7a1Q63870 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Col7a1Q63870 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Gm9823-201ENSMUST00000051212 327 ntBASIC12.45□□□□□ -0.42
Col7a1Q63870 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.45□□□□□ -0.42
Col7a1Q63870 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.45□□□□□ -0.42
Col7a1Q63870 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col7a1Q63870 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col7a1Q63870 Gm5279-201ENSMUST00000199575 745 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Nsd1-205ENSMUST00000224693 852 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col7a1Q63870 Gm26083-201ENSMUST00000157904 193 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Gm27631-201ENSMUST00000184163 466 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Gm5370-201ENSMUST00000187187 574 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col7a1Q63870 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Col7a1Q63870 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Col7a1Q63870 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col7a1Q63870 Gm38158-201ENSMUST00000194617 339 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Gm9182-201ENSMUST00000217829 639 ntBASIC12.44□□□□□ -0.42
Col7a1Q63870 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col7a1Q63870 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.43□□□□□ -0.42
Col7a1Q63870 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.43□□□□□ -0.42
Col7a1Q63870 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.43□□□□□ -0.42
Col7a1Q63870 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Col7a1Q63870 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.43□□□□□ -0.42
Col7a1Q63870 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.43□□□□□ -0.42
Col7a1Q63870 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.43□□□□□ -0.42
Col7a1Q63870 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col7a1Q63870 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.42□□□□□ -0.42
Col7a1Q63870 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms