Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
AtmQ62388 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
AtmQ62388 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.28□□□□□ -0.12
AtmQ62388 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AtmQ62388 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Gm10478-201ENSMUST00000084451 396 ntBASIC14.28□□□□□ -0.12
AtmQ62388 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.28□□□□□ -0.12
AtmQ62388 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AtmQ62388 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AtmQ62388 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.28□□□□□ -0.12
AtmQ62388 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.28□□□□□ -0.12
AtmQ62388 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
AtmQ62388 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AtmQ62388 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
AtmQ62388 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AtmQ62388 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
AtmQ62388 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
AtmQ62388 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AtmQ62388 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.27□□□□□ -0.12
AtmQ62388 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AtmQ62388 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
AtmQ62388 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.27□□□□□ -0.13
AtmQ62388 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.27□□□□□ -0.13
AtmQ62388 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
AtmQ62388 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
AtmQ62388 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AtmQ62388 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.26□□□□□ -0.13
AtmQ62388 Gm5035-201ENSMUST00000215581 927 ntBASIC14.26□□□□□ -0.13
AtmQ62388 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
AtmQ62388 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
AtmQ62388 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
AtmQ62388 Gm13392-201ENSMUST00000117708 150 ntBASIC14.26□□□□□ -0.13
AtmQ62388 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.26□□□□□ -0.13
AtmQ62388 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.26□□□□□ -0.13
AtmQ62388 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.26□□□□□ -0.13
AtmQ62388 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
AtmQ62388 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AtmQ62388 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AtmQ62388 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
AtmQ62388 Gm9719-201ENSMUST00000162765 543 ntBASIC14.26□□□□□ -0.13
AtmQ62388 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
AtmQ62388 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.25□□□□□ -0.13
AtmQ62388 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.25□□□□□ -0.13
AtmQ62388 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
AtmQ62388 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.25□□□□□ -0.13
AtmQ62388 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AtmQ62388 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
AtmQ62388 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms