Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.68■□□□□ 0.1
Six1Q62231 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.68■□□□□ 0.1
Six1Q62231 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six1Q62231 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Six1Q62231 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Six1Q62231 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Six1Q62231 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Six1Q62231 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.67■□□□□ 0.1
Six1Q62231 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Six1Q62231 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.67■□□□□ 0.1
Six1Q62231 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Six1Q62231 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.67■□□□□ 0.1
Six1Q62231 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Six1Q62231 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Six1Q62231 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.67■□□□□ 0.1
Six1Q62231 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.67■□□□□ 0.1
Six1Q62231 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Six1Q62231 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Six1Q62231 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six1Q62231 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Six1Q62231 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.66■□□□□ 0.1
Six1Q62231 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.66■□□□□ 0.1
Six1Q62231 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Gm11780-201ENSMUST00000136880 516 ntBASIC15.66■□□□□ 0.1
Six1Q62231 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Six1Q62231 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.66■□□□□ 0.1
Six1Q62231 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Six1Q62231 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Six1Q62231 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Six1Q62231 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six1Q62231 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Six1Q62231 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Six1Q62231 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Six1Q62231 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.65■□□□□ 0.1
Six1Q62231 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.65■□□□□ 0.1
Six1Q62231 Gm6296-201ENSMUST00000222599 943 ntBASIC15.65■□□□□ 0.1
Six1Q62231 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Six1Q62231 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Six1Q62231 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Six1Q62231 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six1Q62231 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six1Q62231 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six1Q62231 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms