Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.81□□□□□ -0.36
SspnQ62147 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.81□□□□□ -0.36
SspnQ62147 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SspnQ62147 Gm15165-201ENSMUST00000118140 502 ntBASIC12.81□□□□□ -0.36
SspnQ62147 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.81□□□□□ -0.36
SspnQ62147 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Gm9172-201ENSMUST00000212092 954 ntBASIC12.81□□□□□ -0.36
SspnQ62147 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.81□□□□□ -0.36
SspnQ62147 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.81□□□□□ -0.36
SspnQ62147 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SspnQ62147 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SspnQ62147 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SspnQ62147 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SspnQ62147 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SspnQ62147 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SspnQ62147 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SspnQ62147 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SspnQ62147 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SspnQ62147 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.81□□□□□ -0.36
SspnQ62147 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.8□□□□□ -0.36
SspnQ62147 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SspnQ62147 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.8□□□□□ -0.36
SspnQ62147 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.8□□□□□ -0.36
SspnQ62147 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.8□□□□□ -0.36
SspnQ62147 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.8□□□□□ -0.36
SspnQ62147 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Gm25745-201ENSMUST00000174945 133 ntBASIC12.8□□□□□ -0.36
SspnQ62147 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Gm27867-201ENSMUST00000184778 125 ntBASIC12.8□□□□□ -0.36
SspnQ62147 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.8□□□□□ -0.36
SspnQ62147 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.8□□□□□ -0.36
SspnQ62147 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.8□□□□□ -0.36
SspnQ62147 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SspnQ62147 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SspnQ62147 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SspnQ62147 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SspnQ62147 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SspnQ62147 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SspnQ62147 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SspnQ62147 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SspnQ62147 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SspnQ62147 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SspnQ62147 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
SspnQ62147 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SspnQ62147 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
SspnQ62147 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
SspnQ62147 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SspnQ62147 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.79□□□□□ -0.36
SspnQ62147 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.79□□□□□ -0.36
SspnQ62147 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.79□□□□□ -0.36
SspnQ62147 Gm7367-201ENSMUST00000057611 492 ntBASIC12.79□□□□□ -0.36
SspnQ62147 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms