Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clns1aQ61189 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.09□□□□□ -0.31
Clns1aQ61189 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Gm13168-201ENSMUST00000121771 632 ntBASIC13.09□□□□□ -0.31
Clns1aQ61189 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Gm29257-201ENSMUST00000186115 639 ntBASIC13.09□□□□□ -0.31
Clns1aQ61189 Gm8520-201ENSMUST00000186517 868 ntBASIC13.09□□□□□ -0.31
Clns1aQ61189 Gm21814-202ENSMUST00000203277 873 ntBASIC13.09□□□□□ -0.31
Clns1aQ61189 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.09□□□□□ -0.31
Clns1aQ61189 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clns1aQ61189 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Clns1aQ61189 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clns1aQ61189 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.08□□□□□ -0.31
Clns1aQ61189 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Clns1aQ61189 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.08□□□□□ -0.31
Clns1aQ61189 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clns1aQ61189 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clns1aQ61189 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Clns1aQ61189 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clns1aQ61189 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.08□□□□□ -0.32
Clns1aQ61189 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clns1aQ61189 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.08□□□□□ -0.32
Clns1aQ61189 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.08□□□□□ -0.32
Clns1aQ61189 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.08□□□□□ -0.32
Clns1aQ61189 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clns1aQ61189 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clns1aQ61189 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Clns1aQ61189 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.07□□□□□ -0.32
Clns1aQ61189 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.07□□□□□ -0.32
Clns1aQ61189 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.07□□□□□ -0.32
Clns1aQ61189 Gm26039-201ENSMUST00000158152 144 ntBASIC13.07□□□□□ -0.32
Clns1aQ61189 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.07□□□□□ -0.32
Clns1aQ61189 Gm10052-201ENSMUST00000168019 960 ntBASIC13.07□□□□□ -0.32
Clns1aQ61189 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Gm7729-201ENSMUST00000050143 801 ntBASIC13.07□□□□□ -0.32
Clns1aQ61189 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clns1aQ61189 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Clns1aQ61189 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clns1aQ61189 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clns1aQ61189 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms