Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ClpbQ60649 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ClpbQ60649 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ClpbQ60649 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Gm8344-201ENSMUST00000119813 856 ntBASIC14.67□□□□□ -0.06
ClpbQ60649 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.67□□□□□ -0.06
ClpbQ60649 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
ClpbQ60649 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
ClpbQ60649 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ClpbQ60649 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ClpbQ60649 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ClpbQ60649 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.67□□□□□ -0.06
ClpbQ60649 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ClpbQ60649 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
ClpbQ60649 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ClpbQ60649 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.66□□□□□ -0.06
ClpbQ60649 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.66□□□□□ -0.06
ClpbQ60649 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ClpbQ60649 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.66□□□□□ -0.06
ClpbQ60649 Mir5126-201ENSMUST00000175513 77 ntBASIC14.66□□□□□ -0.06
ClpbQ60649 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.66□□□□□ -0.06
ClpbQ60649 Gm6550-201ENSMUST00000187574 993 ntBASIC14.66□□□□□ -0.06
ClpbQ60649 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.66□□□□□ -0.06
ClpbQ60649 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.66□□□□□ -0.06
ClpbQ60649 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ClpbQ60649 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
ClpbQ60649 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.66□□□□□ -0.06
ClpbQ60649 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ClpbQ60649 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ClpbQ60649 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
ClpbQ60649 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ClpbQ60649 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
ClpbQ60649 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.65□□□□□ -0.06
ClpbQ60649 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ClpbQ60649 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ClpbQ60649 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.65□□□□□ -0.06
ClpbQ60649 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.65□□□□□ -0.06
ClpbQ60649 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.65□□□□□ -0.06
ClpbQ60649 AV026068-213ENSMUST00000223675 1171 ntBASIC14.65□□□□□ -0.06
ClpbQ60649 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
ClpbQ60649 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ClpbQ60649 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms