Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom1Q5SX79 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Gm15920-201ENSMUST00000118998 402 ntBASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Shroom1Q5SX79 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Gm8396-201ENSMUST00000057361 823 ntBASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Shroom1Q5SX79 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Mir1895-201ENSMUST00000122615 79 ntBASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Gm5177-201ENSMUST00000183092 997 ntBASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Gm45612-201ENSMUST00000211320 160 ntBASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shroom1Q5SX79 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.22■□□□□ 0.19
Shroom1Q5SX79 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Gm27301-201ENSMUST00000184012 127 ntBASIC16.22■□□□□ 0.19
Shroom1Q5SX79 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Gm27494-201ENSMUST00000184735 189 ntBASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms